Frankly, I don’t understand your complaint. Both theists and non-theists agree that there was some point in the past when non-living ingredients (various chemical elements found in our universe) came together to produce the first living organisms. Living organisms from non-living ingredients is known as abiogenesis. The alternative is to claim that living organisms ALWAYS existed—and I don’t know anyone who believes that.
So what is the disagreement? The Bible in Genesis 1:12 (NASB 1995) says, “The earth brought forth vegetation, plants yielding seed after their kind, and trees bearing fruit with seed in them, after their kind . . .” Genesis 1:24 says, “Let the earth bring forth living creatures after their kind: cattle and creeping things and beasts of the earth after their kind." Thus, the Bible clearly teaches that the earth [i.e., non-living material] produced both plants and animal life. That sure sounds like abiogenesis to me.
If you are objecting because “atheist” scientists (as well as scientists who happen to be agnostic and scientists who happen to be theistic and even Bible-affirming Christians) don’t happen to mention God in science textbooks and peer-reviewed journal articles, then you are simply confusing ultimate and proximate causation.
The chemical elements of the planet (as in soil, water, air, and even “the dust of the ground”) combining at some time in the past to form the first living organisms is simply a summary of the proximate cause. Whether or not God was the ultimate cause is a different philosophical and theological question, not a scientific question. The ultimate cause is not a scientific question because there is no way under the scientific method to subject deities (or anything which is not a part of the matter-energy universe) to scientific testing and verification. So there is no reason for scientists (whatever their personal beliefs or non-beliefs about God) to mention God when publishing their scientific research.
Science is not synonymous with philosophy. (It is a small subset of philosophy which arose as natural philosophy and eventually evolved into what became known as modern science.) I think you are confusing the two.
Speaking for myself, I have no problems believing that God could create a universe where abiogenesis processes produced the first living organisms—just as Genesis 1 describes. So I have no beef with “atheist scientists” or anybody else who is trying to understand those proximate causes which, no doubt, involved the laws of chemistry and physics. Only a weak deity would be incapable of creating a universe which inevitably produced living things through natural processes, aka abiogenesis.
I don’t see any conflict between the abiogenesis described in Genesis 1 and the abiogenesis being investigated by scientists. Why create an argument where none is warranted? I would be delighted if within my lifetime I could read detailed scientific descriptions of how the first living organisms came to be. The discovery of the proximate cause(s) of biological life in no way undermines philosophical/theological claims of the ultimate cause.
Your position reminds me of those chemists in the era before Friedrich Wohler who insisted that scientists would never be able to synthesize a biochemical produced by a living organism. (If you are not familiar with the distinction between organic and inorganic chemistry in those days, please check it out.) They insisted that organic compounds were somehow “magical” in that only God (through the living organisms he had created) could make them. Of course, Wohler proved them wrong.
It will not surprise me in the least if someday a headline reads, “Scientist produce a synthetic organism in the lab.” It certainly poses no threat to my theology—just as the synthesis of urea by Wohler posed no threat.